CDS

Accession Number TCMCG015C56755
gbkey CDS
Protein Id XP_027090772.1
Location complement(join(5109754..5109803,5110783..5110860,5110949..5111056,5111537..5111660,5111829..5111946,5113383..5113513,5113627..5113687,5114532..5114625,5114941..5115028,5115646..5115759,5116499..5116544,5116971..5117043,5117442..5117544,5117654..5117713,5117810..5117893))
Gene LOC113711772
GeneID 113711772
Organism Coffea arabica

Protein

Length 443aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA506972
db_source XM_027234971.1
Definition tRNA pseudouridine(38/39) synthase-like [Coffea arabica]

EGGNOG-MAPPER Annotation

COG_category J
Description synthase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
KEGG_ko ko:K01855        [VIEW IN KEGG]
EC 5.4.99.45        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0001522        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006400        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008033        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009982        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016556        [VIEW IN EMBL-EBI]
GO:0016853        [VIEW IN EMBL-EBI]
GO:0016866        [VIEW IN EMBL-EBI]
GO:0031119        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1990481        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATCTCGCAAACTCCGACTCCGATGTGGACCTCATCAGCTCTCTACAAGCACAGCTCCACTCTCTCCAGAAAAGAGTCAAGGAGTTAGAATCAGAAAAGGCTAAGTTGTCGTTATTGCTATCAAATTGCCATTGTCAAAAGGGGCAGGAAAATGTTAATGCTAGTGCTGTAGCTGAGGAGTTAGAGGAATTAAAAATAGAGGGTGACTTAGCAACCTACAAAGGGAGAACGAAGAAAGATTCAGGTCCCCAGACAAGTGGTGTGCGTCAATTCCCCAGGAGATATGTTGCTTTAAAAGTTATGTACCTTGGTCAGAGGTTTTATGGTTTTGCTTCAGAGGCACACATGGATCCAACTGTGGAGTCTGAAATTTTTAGAGCTCTTAAGAAGACAAATCTCATTGATAGAGTAGACAAGAAGGAACTACAATACTCAAGATGTGGTAGAACAGACAAAGGAGTTTCTTCTACTGGGCAAGTAATTGCTCTGTTTTTACGGTCAAACCTGAAGCAAACAAGAGGGAACACTGAATATGCTGGAGATATTTGGCCGGAAGAATCATGTGGAGAAATGGACTATGTTGGCATAATTAATAAAGTCCTTCCAAAAGATATTCAAGTTATGGGTTGGTCTCCTGCTCCAGTTGATTTCAGTGCAAGGTTCAGCTGTTTAAGTAGACAATATAAGTACTTCTTTTGGAGGGATAATCTTAATATAATGGCAATGGAGACTGCTGGGAAGAAATTTCTTGGTGAACATGATTTCCGAAACTTTTGCAAGATGGATGCGATTAATGTACACAATTTCAGACGTTGCATCACGCTATTTGAGATTTCCCGTTGCAGTGAAAGTTTTGAGGACAATGAACTCTGGGCGATAAAAATTAAAGGTAGTGCTTTCCTGTGGCACCAAATCCGATGCATGGCTGCTCTACTATTTCTGATCGGAGAAGGCCTTGAAACTCCTAATGTTATAGATTTATTACTTGATACTGAGAAGACAACAAGGAAACCTCAATACACAATGGCTGCAGAAATTCCACTAGTTCTTCAATCTTGTGAATTTGAAGGTCTTAGATTCATTTGTTCATCAGGTGCTAAACAAGCTTTGGCTGAGCACTTGAAGAAGGAATGCCTTAATTACAAGCTTCAAGCTGCAATATATGATGAGGCTTTGCAGAGCTGTTCCCTTATTGAAACTGATGACAGTTTGCTGAATACTGTTAGATTGAAACATAGGAAAGCTGTCTATGTTCCCATCATGTCAAGGCCCACCGAACCTTCCTATGAAGAGCGGCGTGCTAAATTTAGCACTGCAGGTAAAACATGA
Protein:  
MDLANSDSDVDLISSLQAQLHSLQKRVKELESEKAKLSLLLSNCHCQKGQENVNASAVAEELEELKIEGDLATYKGRTKKDSGPQTSGVRQFPRRYVALKVMYLGQRFYGFASEAHMDPTVESEIFRALKKTNLIDRVDKKELQYSRCGRTDKGVSSTGQVIALFLRSNLKQTRGNTEYAGDIWPEESCGEMDYVGIINKVLPKDIQVMGWSPAPVDFSARFSCLSRQYKYFFWRDNLNIMAMETAGKKFLGEHDFRNFCKMDAINVHNFRRCITLFEISRCSESFEDNELWAIKIKGSAFLWHQIRCMAALLFLIGEGLETPNVIDLLLDTEKTTRKPQYTMAAEIPLVLQSCEFEGLRFICSSGAKQALAEHLKKECLNYKLQAAIYDEALQSCSLIETDDSLLNTVRLKHRKAVYVPIMSRPTEPSYEERRAKFSTAGKT